Working with Intact Mass Workflows

Learn to run intact mass workflows in Byos, manage raw data, protein sequences, delta masses, and deconvolution settings. Generate reports for ADCs, glycosylation, and oligonucleotide analysis with custom workflows and auto-assigned protein masses.

Series Content

Introduction to Intact Mass Workflows

INSIDE THE VIDEO
Learn to run intact mass workflows with Byos One Touch. Add raw data, adjust settings, and generate reports. Supports ADC, native MS, and glycosylation analysis.
LENGTH
4 mins

Adding Data and Peaks Integration

INSIDE THE VIDEO
Learn to add MS raw data and set integration settings in Byos Intact Mass workflow. Drag/drop files, adjust integration types, and define time windows.
LENGTH
3 mins

Adding Protein Sequences

INSIDE THE VIDEO
Learn to add protein sequences in Byos' intact mass workflow. Drag/drop FASTA files, create antibodies, and manage impurities or protein complexes efficiently.
LENGTH
5 mins

Managing Delta Mass

INSIDE THE VIDEO
Manage delta masses in Byos' intact mass workflow. Add manually, import via CSV, or create combinations for multiple PTMs or modifications using the combination tool.
LENGTH
4 mins

Managing Deconvolution Settings

INSIDE THE VIDEO
Learn how to manage deconvolution settings in Byos' intact mass workflow. Adjust mass ranges, peak detection, and handle isotopic data for comprehensive analysis.
LENGTH
3 mins

Using the GUI for Intact Mass

INSIDE THE VIDEO
Overview of Byos' intact mass workflow interface. Navigate sample files, visualize peaks, adjust chromatograms, and link deconvoluted spectra to TIC/MS1.
LENGTH
4 mins

Using CSV Workflows

INSIDE THE VIDEO
Learn how to perform batch analysis using an intact mass flow. Import a CSV file through the Sample Protein Input tab, essential for populating the sample MS raw data file.
LENGTH
3 mins

Overview to Intact Mass Reports

INSIDE THE VIDEO
Watch the video to learn how to generate reports using various templates and customize them with charts, normalization calculations, and source summaries in Byos.
LENGTH
6 Minutes

Using the ADC Workflow

INSIDE THE VIDEO
Learn how to use the ADC workflow for drug-to-antibody ratio (DAR) analysis. Set sequences, modify Delta Masses, and generate normalized intensity reports.
LENGTH
3 mins

Learn More

Intact How-Tos

Knowledge Base commonly asked questions about intact workflows

Workflow Setup for Low MW (<10 kDa) Isotopically Resolved Peptides

Knowledge Base article on setting up a workflow for low MW peptides

Add an optical trace (UV, FL, etc.) to a project in Intact and Chromatogram workflows

Knowledge Base Article for Intact and Chromatogram workflows

More Resources

An easy guide to getting started with intact, reduced, ADC, intact reconstruction, and IntaBio icIEF-MS workflows.
Watch this video on a novel serum stability assay, enhancing accuracy in biologics screening with in vitro methods.
The Byonic tutorials explain MS/MS integration, peptide searches, charge adjustments, filtering PSMs, and report generation.
Learn about multispecific antibodies and the use of 2D LC-MS for improved production and analysis.

Get started with Protein Metrics